2024
1. 郭成飞*, 李婧妍, 江劭玮*, 邵晓鹏*, 郑国安. (2024). 无透镜编码叠层显微成像原理及研究进展 (特邀). Laser & Optoelectronics Progress, 61(6), 0618003.
2. Xingru Huang, Jian Huang, Tianyun Zhang, He Hong*, Shaowei Jiang*, and Yaoqi Sun*. Upping the Game: How 2D U-Net Skip Connections Flip 3D Segmentation. Advances in Neural Information Processing Systems 37 (2024): 87282-87309.
3. Chengfei Guo, Yiming Huang, Ruiqi Han, Ruihai Wang, Qianhao Zhao, Shaowei Jiang, Pengming Song*, Xiaopeng Shao*, and Guoan Zheng. Fly-scan high-throughput coded ptychographic microscopy via active micro-vibration and rolling-shutter distortion correction. Optics Express 32, no. 6 (2024): 8778-8790.
4. 马昊杰, 张聪, 吴华铮, 郭成飞*, 江劭玮*. 术中无标记显微成像技术发展与应用 (特邀). 红外与激光工程 53, no. 9 (2024): 20240384-1.
5. Zhou, You, Weizhi Song, Linyuan Wu, Lin Fan, Junjia Wang, Shaowei Jiang, Zhan Ma, Bo Xiong*, and Xun Cao*. Large‐Scale Lensless Microscopy with Fast Acquisition and Region‐Wise Focusing. Laser & Photonics Reviews 18, no. 10 (2024): 2400498.
2023
1. Shaowei Jiang, Pengming Song, Tianbo Wang, Liming Yang, Ruihai Wang, Chengfei Guo, Bin Feng, Andrew Maiden, Guoan Zheng*, Spatial- and Fourier-domain ptychography for high-throughput bio-imaging. Nat Protoc 18, 2051–2083 (2023).
2. Lucas Kreiss*, Shaowei Jiang, Xiang Li, Shiqi Xu, Kevin C. Zhou, Kyung Chul Lee, Alexander Mühlberg, Kanghyun Kim, Amey Chaware, Michael Ando, Laura Barisoni, Seung Ah Lee, Guoan Zheng, Kyle J. Lafata, Oliver Friedrich, Roarke Horstmeyer, Digital staining in optical microscopy using deep learning - a review. PhotoniX 4, 34 (2023).
3. Chengfei Guo†, Shaowei Jiang†, Liming Yang†, Pengming Song, Azady Pirhanov, Ruihai Wang, Tianbo Wang, Xiaopeng Shao, Qian Wu, Yong Ku Cho, Guoan Zheng*, Depth-multiplexed ptychographic microscopy for high-throughput imaging of stacked bio-specimens on a chip, Biosensors and Bioelectronics, 224,115049 (2023).
4. Pengming Song†, Tianbo Wang†, Shaowei Jiang, Chengfei Guo, Ruihai Wang, Liming Yang, You Zhou, and Guoan Zheng*, Freeform illuminator for computational microscopy, Intelligent Computing, 2, 0015, (2023).
5. Tianbo Wang†, Shaowei Jiang†, Pengming Song†, Ruihai Wang, Liming Yang, Terrance Zhang, and Guoan Zheng*, Optical ptychography for biomedical imaging: recent progress and future directions [Invited], Biomedical Optics Express, 14(2), 489-532, (2023).
6. Xuyang Chang, Shaowei Jiang, Yongcun Hu, Guoan Zheng, and Liheng Bian*, Pixel super-resolved lensless on-chip sensor with scattering multiplexing, ACS Photonics, 10(2), (2023).7. Tianbo Wang†, Pengming Song†, Shaowei Jiang†, Ruihai Wang, Liming Yang, Chengfei Guo, Zibang Zhang, and Guoan Zheng*, Remote referencing strategy for high-resolution coded ptychographic imaging, Optics Letters, 48(2), 485-488, (2023).
Presentation of some top journals:
2022
1. Pengming Song†, Shaowei Jiang†, Tianbo Wang, Chengfei Guo, Ruihai Wang, Terrance Zhang, and Guoan Zheng*, Synthetic aperture ptychography: coded sensor translation for joint spatial-Fourier bandwidth expansion, Photonics Research, 10(7), 1624-1632 (2022).
2. Xuyang Chang, Shaowei Jiang, Guoan Zheng, and Liheng Bian*, Deep distributed optimization for blind diffuser-modulation ptychography, Optics Letters, 47(12), 3015-3018 (2022).
3. Shaowei Jiang†, Chengfei Guo†*, Tianbo Wang†, Jia Liu, Pengming Song, Terrance Zhang, Ruihai Wang, Bin Feng, and Guoan Zheng*, Blood-coated sensor for high-throughput ptychographic cytometry on a Blu-ray disc, ACS Sensors, 7(4), 1058-1067 (2022).
4. Shaowei Jiang†, Chengfei Guo†*, Zichao Bian†, Ruihai Wang, Jiakai Zhu, Pengming Song, Patrick Hu, Derek Hu, Zibang Zhang, Kazunori Hoshino, Bin Feng, Guoan Zheng, Ptychographic sensor for large-scale lensless microbial monitoring with high spatiotemporal resolution, Biosensors and Bioelectronics, 196, 113699, 2022.
5. Shaowei Jiang†, Chengfei Guo†*, Pengming Song†, Tianbo Wang, Ruihai Wang, Terrance Zhang, Qian Wu, Rishikesh Pandey, and Guoan Zheng*, High-throughput digital pathology via a handheld, multiplexed, and AI-powered ptychographic whole slide scanner, Lab on a Chip, 22, (2022).
Presentation of some top journals:
2021
1. Chengfei Guo†, Shaowei Jiang†, Liming Yang, Pengming Song, Tianbo Wang, Xiaopeng Shao*, Zibang Zhang, Michael Murphy, and Guoan Zheng*, Deep learning-enabled whole slide imaging (DeepWSI): oil-immersion quality using dry objectives, longer depth of field, higher system throughput, and better functionality, Opt. Express 29, 39669-39684 (2021)
2. Yue Huang, Shaowei Jiang*, Ruihai Wang, Pengming Song, Jian Zhang, Guoan Zheng, Xiangyang Ji, and Yongbing Zhang*, Ptychography-based high-throughput lensless on-chip microscopy via incremental proximal algorithms, Opt. Express 29, 37892-37906 (2021)
3. Chengfei Guo, Shaowei Jiang, Pengming Song, Tianbo Wang, Xiaopeng Shao*, Zibang Zhang, and Guoan Zheng*, Quantitative multi-height phase retrieval via a coded image sensor, Biomed. Opt. Express 12, 7173-7184 (2021)
4. Shaowei Jiang, Guoan Zheng*, Effective color transfer enables rapid computational microscopy for digital pathology. Sci. China Phys. Mech. Astron. 64, 114231 (2021).
5. Shaowei Jiang†, Chengfei Guo†, Patrick Hu, Derek Hu, Pengming Song, Tianbo Wang, Zichao Bian, Zibang Zhang, and Guoan Zheng*, High-throughput lensless whole slide imaging via continuous height-varying modulation of a tilted sensor, Opt. Lett. 46, 5212-5215 (2021).
6. Shaowei Jiang†, Chengfei Guo†*, Pengming Song, Niyun Zhou, Zichao Bian, Jiakai Zhu, Ruihai Wang, Pei Dong, Zibang Zhang, Jun Liao, Jianhua Yao, Bin Feng, Michael Murphy, and Guoan Zheng*, Resolution-Enhanced Parallel Coded Ptychography for High-Throughput Optical Imaging, ACS Photonics 8(11), 3261-3271 (2021).
7. Kaifa Xin, Shaowei Jiang, Xu Chen, Yonghong He, Jian Zhang, Hongpeng Wang, Honghai Liu, Qin Peng, Yongbing Zhang*, and Xiangyang Ji*, Low-cost whole slide imaging system with single-shot autofocusing based on color-multiplexed illumination and deep learning, Biomed. Opt. Express 12, 5644-5657 (2021)
8. Chengfei Guo†, Shaowei Jiang†, Pengming Song, Zichao Bian, Tianbo Wang, Pouria Hoveida, and Xiaopeng Shao*. Bypassing the resolution limit of diffractive zone plate optics via rotational Fourier ptychography. Optics Communications (2021): 127031.
9. Chengfei Guo†, Zichao Bian†, Soliman Alhudaithy†, Shaowei Jiang, Yuji Tomizawa, Pengming Song, Tianbo Wang, and Xiaopeng Shao*, Brightfield, fluorescence, and phase-contrast whole slide imaging via dual-LED autofocusing, Biomed. Opt. Express 12, 4651-4660 (2021)
10. Xu Chen, Bowen Li, Shaowei Jiang, Terrance Zhang, Xu Zhang, Xi Yuan, Peiwu Qin, Yongbing Zhang*, Guoan Zheng, and Xiangyang Ji, Accelerated Phase Shifting for Structured Illumination Microscopy based on Deep Learning, IEEE Transactions on Computational Imaging, 7, 700-712 (2021).
11. Changchun Lu†, You Zhou†, Yanxun Guo†, Shaowei Jiang, Zibang Zhang*, Guoan Zheng, and Jingang Zhong, Mask-modulated lensless imaging via translated structured illumination, Opt. Express 29 (8), 12491-12501 (2021)
12. Zichao Bian, Tiantian Guo, Shaowei Jiang, Longtu Chen, Jia Liu, Guoan Zheng* and Bin Feng*, High-throughput functional characterization of visceral afferents by optical recordings from thoracolumbar and lumbosacral dorsal root ganglia, Frontiers in Neuroscience, 15, 657361, (2021).
13. Guoan Zheng*, Cheng Shen, Shaowei Jiang, Pengming Song, and Changhuei Yang*. Concept, implementations and applications of Fourier ptychography. Nature Reviews Physics, 1-17, (2021).
14. Yongbing Zhang, Yangzhe Liu, Shaowei Jiang, Krishna Dixit, Pengming Song, Xinfeng Zhang, Xiangyang Ji, Xiu Li*, Neural network model assisted Fourier ptychography with Zernike aberration recovery and total variation constraint, J. Biomed. Opt. 26(3) 036502
15. Pengming Song†, Chengfei Guo†*, Shaowei Jiang†, Tianbo Wang, Patrick Hu, Derek Hu, Zibang Zhang, Bin Feng, and Guoan Zheng*, Optofluidic ptychography on a chip, Lab on a Chip, 21(23), 4509-4726 (2021).
Presentation of some top journals:
2020
1. Ruihai Wang†, Pengming Song†*, Shaowei Jiang†, Chenggang Yan, Jiakai Zhu, Chengfei Guo, Zichao Bian, Tianbo Wang, and Guoan Zheng*, Virtual brightfield and fluorescence staining for Fourier ptychography via unsupervised deep learning, Optics Letter, 45(19), (2020).
2. Zichao Bian†, Chengfei Guo†, Shaowei Jiang*, Jiakai Zhu, Ruihai Wang, Pengming Song, Zibang Zhang, Kazunori Hoshino, and Guoan Zheng*. Autofocusing technologies for whole slide imaging and automated microscopy. Journal of Biophotonics (2020): e202000227.
3. Shaowei Jiang, Zichao Bian, Jiakai Zhu, Pengming Song, Chengfei Guo, He Zhang, Ruihai Wang, Guoan Zheng, High-throughput and field-portable ptychographic lensless on-chip microscopy based on translated pattern modulation, Proc. SPIE 11250, High-Speed Biomedical Imaging and Spectroscopy V, 112500E (2020).
4. Pengming Song†, Ruihai Wang†, Jiakai Zhu, Tianbo Wang, Zichao Bian, Zibang Zhang, Kazunori Hoshino, Michael Murphy, Shaowei Jiang*, Chengfei Guo*, and Guoan Zheng, Super-resolved multispectral lensless microscopy via angle-tilted, wavelength-multiplexed ptychographic modulation, Optics Letter, 45(12), (2020).
5. Shaowei Jiang†, Jiakai Zhu†, Pengming Song†, Chengfei Guo†*, Zichao Bian, Ruihai Wang, Yikun Huang, Shiyao Wang, He Zhang, and Guoan Zheng*, Wide-field, high-resolution lensless on-chip microscopy via near-field blind ptychographic modulation, Lab on a Chip, 20 (6), 1058-1065, (2020).
6. Chengfei Guo, Zichao Bian, Shaowei Jiang, Michael Murphy, Jiakai Zhu, Ruihai Wang, Pengming Song, Xiaopeng Shao, Yongbing Zhang, and Guoan Zheng, OpenWSI: a low-cost, high-throughput whole slide imaging system via single-frame autofocusing and open-source hardware, Opt. Lett. 45, 260-263 (2020).
Presentation of some top journals:
2019
1. Zichao Bian†, Shaowei Jiang†*, Pengming Song, He Zheng, Pouria Hoveida, Kazunori Hoshino, Guoan Zheng, Ptychographic modulation engine (PME): a low-cost DIY microscope add-on for coherent super-resolution imaging, Journal of Physics D: Applied Physics, 53, 014005, (2019).
2. Teng Zhang† , Shaowei Jiang† , Zixin Zhao† , Krishna Dixit, Xiaofei Zhou, Jia Hou, Yongbing Zhang, and Chenggang Yan*, Rapid and robust two-dimensional phase unwrapping via deep learning, Opt. Express 27, 23173-23185 (2019).
3. Pengming Song† , Shaowei Jiang† , He Zhang† , Zichao Bian, Chengfei Guo, Kazunori Hoshino, and Guoan Zheng*, Super-resolution microscopy via ptychographic structured modulation of a diffuser, Opt. Lett. 44, 3645-3648 (2019).
4. Xiu Li† , Huaiyu Qi† , Shaowei Jiang, Pengming Song, Guoan Zheng, and Yongbing Zhang*, Quantitative phase imaging via a cGAN network with dual intensity images captured under centrosymmetric illumination, Opt. Lett. 44, 2879-2882 (2019).
5. Pengming Song† , Shaowei Jiang† , He Zhang, Xizhi Huang, Yongbing Zhang, Guoan Zheng*, Full-field Fourier ptychography (FFP): spatially varying pupil modeling and its application for rapid field-dependent aberration metrology, APL Photonics, 4, 050802, (2019).
6. Shaowei Jiang† , Zichao Bian† , Xizhi Huang† , Pengming Song, He Zhang, Yongbing Zhang, and Guoan Zheng*, Rapid and robust whole slide imaging based on LED-array illumination and color-multiplexed single-shot autofocusing, Quantitative Imaging in Medicine and Surgery, 9(5), (2019).
7. He Zhang† , Zichao Bian† , Shaowei Jiang† , Jian Liu*, Pengming Song, and Guoan Zheng*, Field-portable quantitative lensless microscopy based on translated speckle illumination and sub-sampled ptychographic phase retrieval, Opt. Lett. 44, 1976-1979 (2019)
8. He Zhang† , Shaowei Jiang† , Jun Liao, Junjing Deng, Jian Liu, Yongbing Zhang, and Guoan Zheng*, Near-field Fourier ptychography: super-resolution phase retrieval via speckle illumination, Optics Express, 27(5),7498-7512, (2019).
9. Shaowei Jiang, Jun Liao, Zichao Bian, Pengming Song, Garrett Soler, Kazunori Hoshino, and Guoan Zheng*, Axially-shifted pattern illumination for macroscale turbidity suppression and virtual volumetric confocal imaging without axial scanning, Optics Letters, 44(4), (2019).
Presentation of some top journals:
2015-2018
1. Shaowei Jiang†, Kaikai Guo†, Jun Liao, Guoan Zheng*, Solving Fourier ptychographic imaging problems via neural network modeling and TensorFlow, Biomedical Optics Express, 9(7), 3306-3319, (2018).
2. Jun Liao, Shaowei Jiang, Zibang Zhang, Kaikai Guo, Zichao Bian, Yutong Jiang, Jingang Zhong, Guoan Zheng*, Terapixel hyperspectral whole slide imaging via slit-array detection and projection, Journal of Biomedical Optics, 23(6), 066503, (2018).
3. Zibang Zhang†, You Zhou†, Shaowei Jiang, Kaikai Guo, Kazunori Hoshino, Jingang Zhong, Jinli Suo, Qionghai Dai, and Guoan Zheng*, Mask-modulated lensless imaging with multi-angle illuminations, APL Photonics 3, 060803 (2018).
4. Shaowei Jiang†, Jun Liao†, Zichao Bian, Kaikai Guo, Yongbing Zhang, and Guoan Zheng*, Transform- and multi-domain deep learning for single-frame rapid autofocusing in whole slide imaging, Biomedical Optics Express, 9(4), (2018).
5. Jun Liao, Zhe Wang, Zibang Zhang, Zichao Bian, Kaikai Guo, Aparna Nambiar, Yutong Jiang, Shaowei Jiang, Jingang Zhong, Michael Choma, and Guoan Zheng*, Dual-LED-based multichannel microscopy for wholeslide multiplane, multispectral, and phase imaging, Journal of Biophotonics, 10.1002/jbio.201700075 (2017).
6. Kaikai Guo†, Zibang Zhang†, Shaowei Jiang†, Jun Liao, Jingang Zhong, Yonina C. Eldar, and Guoan Zheng*, 13-fold resolution gain through turbid layer via translated unknown speckle illumination, Biomedical Optics Express, 9(1), (2018).
7. Kaikai Guo, Shaowei Jiang, and Guoan Zheng*, Multilayer fluorescence imaging on a single-pixel detector, Biomedical Optics Express, 7, 7, 2425 (2016).
8. Siyuan Dong, Kaikai Guo, Shaowei Jiang, and Guoan Zheng*, Recovering higher dimensional image data using multiplexed structured illumination, Optics Express, 23, 23, 30393 (2015).
Presentation of some top journals: